Books

Papers/Articles

Books : reviews

[cover]

Mark A. Bedau, John S. McCaskill, Norman H. Packard, Steen Rasmussen, editors. Artificial Life VII: proceedings of the seventh international conference on artificial life, Portland OR. MIT Press. 2000

The papers are gathered under the following headings: • Origin of Life, Self-Organization, and Self-Replication • Development and Differentiation • Evolutionary and Adaptive Dynamics • Robots and Autonomous Agents • Communication, Cooperation, and Collective Behavior • Methodological and Technological Applications • The Broader Context

Contents

Hector Fabio Restrepo, Daniel Mange, Moshe Sipper.
A Self-Replicating Universal Turing Machine: From von Neumann's Dream to New Embryonic Circuits
Alan Dorin.
Creating a Physically-based, Virtual-Metabolism with Solid Cellular Automata
Hiroki Sayama.
Self-Replicating Worms That Increase Structural Complexity through Gene Transmission
Uwe Tangen.
Self-Organisation in Micro-Configurable Hardware
Hugues Bersini.
Reaction Mechanisms in the OO Chemistry
Pietro Speroni di Fenizio.
A Less Abstract Artificial Chemistry
Yasuhiro Suzuki, Hiroshi Tanaka.
Chemical Evolution among Artificial Proto-cells
Harald Huning.
A Search for Multiple Autocatalytic Sets in Artificial Chemistries based on Boolean Networks
Ezequiel A. Di Paolo.
Searching for Rhythms in Asynchronous Random Boolean Networks
S. Kazadi, D. Lee, R. Modi, J. Sy, W. Lue.
Levels of Compartmentalization in Alife
Keith Downing.
Exploring Gaia Theory: Artificial Life on a Planetary Scale
Chikara Furusawa, Kunihiko Kaneko.
Complex Organization in Multicellularity as a Necessity in Evolution
Kunihiko Kaneko, Tetsuya Yomo.
Sympatric Speciation from Interaction-induced Phenotype Differentiation
Hiroaki Takagi, Kunihiko Kaneko.
Evolution of Genetic Code through Isologous Diversification of Cellular States
Thomas S. Ray, Joseph F. Hart.
Evolution of Differentiation in Multithreaded Digital Organisms
Cefn Hoile, Richard Tateson.
Design by Morphogenesis
Alistair G. Rust, Rod Adams, Hamid Bolouri.
Evolutionary Neural Topiary: Growing and Sculpting Artificial Neurons to Order
David G. Green, David Newth, Michael G. Kirley.
Connectivity and Catastrophe---Towards a General Theory of Evolution
Rob Shipman, Mark Shackleton, Marc Ebner, Richard A. Watson.
Neutral Search Spaces for Artificial Evolution: A Lesson from Life
Richard A. Watson, Torsten Reil, Jordan B. Pollack.
Mutualism, Parasitism, and Evolutionary Adaptation
Michael L. Best.
Coevolving Mutualists Guide Simulated Evolution
Eizo Akiyama, Kunihiko Kaneko.
Evolution of Cooperation in Social Dilemma---Dynamical Systems Game Approach
Takaya Arita, Reiji Suzuki.
Interactions between Learning and Evolution: The Outstanding Strategy Generated by the Baldwin Effect
Hideaki Suzuki.
Evolvability Analysis: Distribution of Hyperblobs in a Variable-Length Protein Genotype Space
Daniel Wagenaar, Christoph Adami.
Influence of Chance, History and Adaptation on Evolution in Digitalia
Stevan Jay Anastasoff.
Ecology and Extinction---Macroevolutionary Extinction Dynamics in a Simulated Ecosystem
Shinichiro Yoshii, Eiichi Miyamoto, Yukinori Kakazu.
Quantification of Microscopic Events in the Process of Long-Term Evolutionary Dynamics
Russell K. Standish.
An Ecolab Perspective on the Bedau Evolutionary Statistics
Patricio Lerena.
Mate Choice: Simple or Complex?
Paul Domjan.
A Discussion of the Use of Artificial Life Models to Evaluate Gould's Hypothesis about Progress in Evolution
Tatsuo Unemi.
Should Seeds Fly or Not?
Bernard D. Reger, Karen M. Fleming, Vittorio Sanguineti, Simon Alford, Ferdinando A. Mussa-Ivaldi.
Connecting Brains to Robots: The Development of a Hybrid System for the Study of Learning in Neural Tissues
Stevan Jay Anastasoff.
A ' Fitness Landscaping' Comparison of Evolved Robot Control Systems
Hod Lipson, Jordan B. Pollack.
Evolving Physical Creatures
Edgar E. Vallejo, Ferdando Ramos.
Evolving Insect Locomotion Using Non-uniform Cellular Automata
Maciej Komosinski, Adam Rotaru-Varga.
From Directed to Open-Ended Evolution in a Complex Simulation Model
Masayasu Atsumi.
Artificial Neural Development for Pulsed Neural Network Design---Generating Place Recognition Circuits of Animats
Yuichi Sato, Takashi Nagai, Hiroshi Yokoi, Takafumi Mizuno, Yukinori Kakazu.
Emergent SMA-Net Robot Control by Coupled Oscillator System
Norman L. Johnson.
Developmental Insights into Evolving Systems: Roles of Diversity, Non-Selection, Self-Organization, Symbiosis
Josh C. Bongard.
Reducing Collective Behavioural Complexity through Heterogeneity
Shin I. Nishimura.
Studying Attention Dynamics of a Predator in a Prey-Predator System
Felix Flentge, Daniel Polani, Thomas Uthmann.
On the Emergence of Possession Norms in Agent Societies
James A. R. Marshall, Jonathan E. Rowe.
Investigating the Mechanisms Underlying Cooperation in Viscous Population Multi-Agent Systems
Lars Kroll Kristensen.
Aintz: A Study of Emergent Properties in a Model of Ant Foraging
Yoshiki Yamaguchi, Tsutomu Maruyama, Tsutomu Hoshino.
A Co-evolution Model of Scores and Strategies in IPD Games: Toward the Understanding of the Emergence of the Social Morals
Norberto Eiji Nawa, Katsunori Shimohara, Osamu Katai.
On the Effect of "Stock Alerts" in an Agent-Based Model of a Financial Market
Frederic Kaplan.
Semiotic Schemata: Selection Units for Linguistic Cultural Evolution
Luc Steels, Pierre-Yves Oudeyer.
The Cultural Evolution of Syntactic Constraints in Phonology
Carlo C. Maley, Stephanie Forrest.
Modeling the Role of Neutral and Selective Mutations in Cancer
Anthony Liekens.
From Individuals to Populations, Approaches to the Study of Biological Emergent Phenomena
Janos Albert.
Towards a Comprehensive Alife-model of the Evolution of the Nervous System and Adaptive Behavior
M. A. Gibney, N. R. Jennings, N. J. Vriend.
Market-Based Call Routing in Telecommunications Networks Using Adaptive Pricing and Real Bidding
Gina M. B. Oliveira, Pedro P. B. de Oliveira, Nizam Omar.
Evolving Solutions of the Density Classification Task in 1D Cellular Automata, Guided by Parameters That Estimate Their Dynamic Behaviour
V. J. Blue, J. L. Adler.
Cellular Automata Model of Emergent Collective Bi-Directional Pedestrian Dynamics
James Macgill.
Using Flocks to Drive a Geographical Analysis Engine
Una-May O'Reilly, Ian Ross, Peter Testa.
Emergent Design: Artificial Life for Architecture Design
Barry McMullin.
John von Neumann and the Evolutionary Growth of Complexity: Looking Backwards, Looking Forwards
Seth Bullock.
What Can We Learn from the First Evolutionary Simulation Model?
David H. Ackley.
Real Artificial Life: Where We May Be
Ezequiel A. Di Paolo, Jason Noble, Seth Bullock.
Simulation Models as Opaque Thought Experiments
Alvaro Moreno.
Artificial Life as a Bridge between Science and Philosophy
J. McKenzie Alexander.
Artificial Justice
Edmund M. A. Ronald, Moshe Sipper.
Engineering, Emergent Engineering, and Artificial Life: Unsurprise, Unsurprising Surprise, and Surprising Surprise
Gary R. Greenfield.
Art and Artificial Life---A Coevolutionary Approach
Eleonora Bilotta, Pietro Pantano, Valerio Talarico.
Synthetic Harmonies: An Approach to Musical Semiosis by Means of Cellular Automata
Christa Sommerer, Laurent Mignonneau.
Modeling Emergence of Complexity: The Application of Complex System and Origin of Life Theory to Interactive Art on the Internet
Arantza Etxeberria.
Artificial Evolution: Creativity and the Possible

[cover]

Russell K. Standish, Mark A. Bedau, Hussein A. Abbass, editors. Artificial Life VIII: proceedings of the eighth international conference on artificial life, Sydney, Australia. MIT Press. 2003

Contents

Carlos Gershenson.
Classification of Random Boolean Networks
Jean-Claude Heudin.
Complexity Classes in Three-dimensional Gravitational Agents
Tatsuya Nomura.
Formal Description of Autopoiesis for Analytic Models of Life and Social Systems
Kazumasa Oida.
The Birth and Death Process of Hypercycle Spirals
David Cornforth, David G. Green, David Newth, Michael G. Kirley.
Do Artificial Ants March in Step? Ordered Asynchronous Processes and Modularity in Biological Systems
Satoshi Kurihara, Kensuke Fukuda, Toshio Hirotsu, Osamu Akashi, Shinya Sato, Toshiharu Sugawara.
Importance of Evolved Structure for Emerging Self-organization in a Complex Competitive Situation
Eleonora Bilotta, Antonio Lafusa, Pietro Pantano.
Is Self-replication an Embedded Characteristic of Artificial/Living Matter?
Hiroki Sayama.
Von Neumann's Machine in the Shell: Enhancing the Robustness of Self-Replication Processes
Andre Stauffer, Moshe Sipper.
Interactive Self-Replicating, Self-Incrementing and Self-Decrementing Loops
Naoaki Ono, Takashi Ikegami.
Selection of Catalysts through Cellular Reproduction
Chrystopher L. Nehaniv.
Evolution in Asynchronous Cellular Automata
Thomas E. Portegys.
An Abstraction of Intercellular Communication
Hiroaki Takagi, Kunihiko Kaneko.
Dynamic Relationship between Diversity and Plasticity of Cell types in Multi-cellular State
Dennis L. Chao, Stephanie Forrest.
Generating Biomorphs with an Aesthetic Immune System
Takamasa Sawada, Atsuko Mutoh, Shohei Kato, Hidenori Itoh.
A Model of Biological Differentiation in Adaptiogenesis to the Environment
Jaime Lagunez-Otero, Pedro Pablo Gonzalez Perez, Maura Cardenas-Garcia, Octavio Rosa, Armando Franyuti.
Cellulat
Lucian Prodan, Gianluca Tempesti, Daniel Mange, Andre Stauffer.
Embryonics: Electronic Stem Cells
D. A. Mac Donaill.
Tautomerism as a Constraint on the Composition of Alternative Nucleotide Alphabets
Gianluca Tempesti, Daniel Roggen, Eduardo Sanchez, Yann Thoma, Richard O. Canham, Andy M. Tyrrell, Juan-Manuel Moreno.
A POEtic Architecture for Bio-Inspired Hardware
Wei-Min Shen, Cheng-Ming Chuong, Peter Will.
Digital Hormone Models for Self-Organization
Marc Metivier, Claude Lattaud, Jean-Claude Heudin.
A Stress-based Speciation Model in LifeDrop
Gary R. Greenfield.
On Attaining Maximal Fitness or How to Evolve Virtual Redwoods
Russell K. Standish.
Diversity Evolution
Xin-She Yang.
Characterization of Multispecies Living Ecosystems With Cellular Automata
Lee Spector.
Adaptive Populations of Endogenously Diversifying Pushpop Organisms are Reliably Diverse
Joshua Mitteldorf, David H. Croll, S. Chandu Ravela.
Multilevel Selection and the Evolution of Predatory Restraint
James R. Watson, Nicholas Geard, Janet Wiles.
Stability and Task Complexity: A Neural Network Model of Evolution and Learning
Dale Thomas.
Aesthetic Selection of Developmental Art Forms
Hideaki Suzuki, Hidefumi Sawai.
Chemical Genetic Algorithms -- Coevolution between Codes and Code Translation
Alastair D. Channon.
Improving and Still Passing the ALife Test: Component-Normalised Activity Statistics Classify Evolution in Geb as Unbounded
Shengxiang Yang.
Adaptive Crossover in Genetic Algorithms Using Statistics Mechanism
Daniel W. Franks, Jason Noble.
The Origins of Mimicry Rings
Seth Bullock.
Will Selection for Mutational Robustness Significantly Retard Evolutionary Innovation on Neutral Networks?
Gina M. B. Oliveira, Jose C. Bortot, Pedro P. B. de Oliveira.
Multiobjective Evolutionary Search for One-Dimensional Cellular Automata in the Density Classification Task
Hiroshi Ito, Takashi Ikegami.
Evolutionary Dynamics of a Food Web with Recursive Branching and Extinction
Takashi Ikegami, Tomoharu Iwata, Koh Hashimoto.
A Network of Dynamic Keystone Species
Tom Lenaerts, Anne Defaweux, Piet van Remortel, Joke Reumers, Bernard Manderick.
Multi-level Selection and Immune Networks: Preliminary Discussion of an Abstract Model
Tim F. Cooper, Charles Ofria.
Evolution of Stable Ecosystems in Populations of Digital Organisms
Andre Skusa, Mark A. Bedau.
Towards a Comparison of Evolutionary Creativity in Biological and Cultural Evolution
Peter Eggenberger Hotz, Gabriel Gomez, Rolf Pfeifer.
Evolving the Morphology of a Neural Network for Controlling a Foveating Retina -- and its Test on a Real Robot
Janne Haverinen, Juha Roning.
A Stochastic Evolutionary Neuron Migration Process with Emerged Hebbian Dynamics
Amelie Schmolke, Hanspeter A. Mallot.
Territory Formation in Mobile Robots
Elaine Catterall, Kristof Van Laerhoven, Martin Strohbach.
Self-Organization in Ad Hoc Sensor Networks: An Empirical Study
Bertrand Mesot, Eduardo Sanchez, Carlos-Andres Pena, Andres Perez-Uribe.
SOS++: Finding Smart Behaviors Using Learning and Evolution
Tom Smith, Philip Husbands, Andy Philippides, Michael O'Shea.
Temporally Adaptive Networks: Analysis of GasNet Robot Control Networks
Matthias Scheutz, Paul Schermerhorn.
Steps Towards a Systematic Investigation of Possible Evolutionary Trajectories from Reactive to Deliberative Control Systems
Andy Philippides, Philip Husbands, Tom Smith, Michael O'Shea.
Fast and Loose: Biologically Inspired Couplings
Matt Quinn, Lincoln Smith, Giles Mayley, Philip Husbands.
Evolving Teamwork and Role-Allocation with Real Robots
Jason Teo, Hussein A. Abbass.
Multi-Objectivity for Brain-Behavior Evolution of a Physically-Embodied Organism
Hiroyuki Iizuka, Takashi Ikegami.
Simulating Turn-Taking Behaviours with Coupled Dynamical Recognizers
Jon Klein.
breve: a 3D Environment for the Simulation of Decentralized Systems and Artificial Life
Dario Floreano, Nicolas Schoeni, Gilles Caprari, Jesper Blynel.
Evolutionary Bits'n'Spikes
Chrystopher L. Nehaniv, Daniel Polani, Kerstin Dautenhahn, Rene te Boekhorst, Lola Canamero.
Meaningful Information, Sensor Evolution, and the Temporal Horizon of Embodied Organisms
Jin Akaishi, Takaya Arita.
Misperception, Communication and Diversity
Steven Mascaro, Kevin B. Korb, Ann E. Nicholson.
ALife Investigation of Parental Investment in Reproductive Strategies
O. Burchan Bayazit, Jyh-Ming Lien, Nancy M. Amato.
Better Group Behaviors in Complex Environments using Global Roadmaps
Zachary Mason.
Programming with Stigmergy: Using Swarms for Construction
Pedro Mariano, Luis Correia.
The Effect of Agreements in a Game with Multiple Strategies for Cooperation
Jason Noble, Daniel W. Franks.
Social Learning Mechanisms Compared in a Simple Environment
Tamon Oboshi, Shohei Kato, Atsuko Mutoh, Hidenori Itoh.
Collective or Scattering: Evolving Schooling Behaviors to Escape from Predator
Mark Dras, K. David Harrison.
Emergent Behavior in Phonological Pattern Change
Anders Eriksson, Kristian Lindgren.
Cooperation in an Unpredictable Environment
Dominique Gross, Barry McMullin.
The Creation of Novelty in Artificial Chemistries
Tatsuo Unemi.
SBEAT3: A Tool for Multi-part Music Composition by Simulated Breeding
Pavel O. Luksha.
Formal Definition of Self-reproductive Systems
Stephen Jones.
Organizing Relations and Emergence
Alan Dorin, Jon McCormack.
Self-Assembling Dynamical Hierarchies

[cover]

Jordan B. Pollack, Mark A. Bedau, Philip Husbands, Takashi Ikegami, Richard A. Watson. Artificial Life IX: proceedings of the ninth international conference on artificial life, Boston, USA. MIT Press. 2004